Current Research
The following is a list (not exhaustive) of research projects that users
of the Core Facility from UW Oshkosh and area academic institutions
are pursuing. Additional details and updates are provided below the
table:
|
Principal
Investigator
|
Institution
|
Dept.
|
Project
|
| Dr.
Todd Sandrin |
UW
Oshkosh |
Biology
and Microbiology |
effects
of metals and their speciation on expression of bacterial metal
resistance mechanisms |
| Dr.
Teri Shors |
UW
Oshkosh |
Biology
and Microbiology |
characterization
of D9 and D10 proteins of vaccinia virus (VV) and the MCOO2L
gene product of MCV |
| Dr.
Toivo Kallas |
UW
Oshkosh |
Biology
and Microbiology |
Rieske
iron-sulfur protein; electron transport and signaling; oxygen
radicals; iron-sulfur cluster biogenesis |
| Dr.
Michelle Michalski |
UW
Oshkosh |
Biology
and Microbiology |
detection
of Anaplasma phagocytophilum in deer and ticks in Wisconsin |
| Dr.
Dana Vaughan |
UW
Oshkosh |
Biology
and Microbiology |
characterization
of retinas before and after induced retinal degeneration |
| Dr.
Sharon Hawi |
UW
Oshkosh |
Biology
and Microbiology |
applications
of fluorescent semiconductor nanocrystals |
| Dr.
Robert Wise |
UW
Oshkosh |
Biology
and Microbiology |
effects
of heat stress on the proteome of cotton |
| Dr.
James Paulson |
UW
Oshkosh |
Chemistry |
mitotic
phosphoproteins; dephosphorylation of proteins during mitotic
exit |
| Dr.
David Hall |
Lawrence
University |
Chemistry |
rhinovirus
infection and regulation of genes involved in asthma |
| Dr.
Colleen Byron |
Ripon
College |
Chemistry |
enzyme
electrochemistry |
| Dr.
Maragaret Stevens |
Ripon
College |
Chemistry |
molecular
genetics of sea urchins |
| Dr.
Russ Feirer |
St.
Norbert College |
Biology |
cellular
and molecular biology of Arabidopsis |
| Dr.
Cynthia Oschler |
St.
Norbert College |
Chemistry |
protein
expression in synaptic neurotransmission |
| Dr.
Warren Johnson |
UW
Green Bay |
Human
Biology |
characterization
of global regulatory factors in E. coli |
More details and updates. . .
During the Spring 2004 semester, Dr. Jim Paulson and chemistry
major Kelly van Vleet used the GelDoc and the fluorescence
imager to study protein phosphorylation and dephosphorylation in mitotic
chromosomes. Proteins were first separated by electrophoresis in SDS
polyacrylamide gels and then, using the fluorescence imager, phosphorylated
proteins were visualized with "ProQ Diamond," a new phosphoprotein
specific fluorescent stain. Afterwards, both phosphorylated and non-phosphorylated
proteins were visualized by staining the gels with Sypro Orange and
scanning on the fluorescence imager, or by staining with Coomassie
Blue and photographing with the GelDoc.
During Summer 2004, Eric Kracht (undergraduate microbiology
major and recipient of a UW Oshkosh Faculty-Undergraduate Collaborative
Research Grant ) worked with Dr. Todd Sandrin to explore mechanisms
by which a naphthalene-degrading bacterium indigenous to the Fox River
(Comomonas testosteroni)resists the toxic effects of cadmium.
Specifically, Kracht and Sandrin investigated proteins that were induced
or suppressed by cadmium. The team isolated two proteins of interest
and are currently characterizing each. A preliminary peptide mass
fingerprint of one of the proteins is shown here
and was obtained using the Bruker Reflex IV MALDI-TOF-MS. Proteins
were separated using gel electrophoresis instrumentation also housed
in the Core Facility.
Also during Summer 2004, Jennifer Okon (undergraduate microbiology
major) and Darryl Horn (Biology graduate student) worked with
Dr. Todd Sandrin to obtain genetic fingerprints of E. coli
isolates found contaminating beaches and recreational swimming waters
across Wisconsin. Okon, Horn, and Sandrin continue to PCR amplify
repetitive genomic elements (BOX) of several hundred of these isolates.
The complex fingerprints were obtained using gel electrophoresis equipment
within the Core Facility. Analyses were performed using software contained
within the Facility. An example gel, containing several fingerprints,
is here.
Two more undergraduates are working with Dr. Sandrin this academic
year and are utilizing additional instrumentation within the Core
Facility. Using DNA microarrays, Candace Otte (undergraduate
microbiology major) will explore whether pH-dependent cadmium speciation
alters gene expression in E. coli. Aso Qader (undergraduate
microbiology major) will use 2-d gels and MALDI-TOF-NS to investigate
whether medium-dependent cadmium speciation affects protein expression
in E. coli.
Katrina Olson, a graduate student in the Department of Biology
and Microbiology at UWOshkosh, is working with Dr. Robert Wise
to characterize effects heat stress on the proteome of cotton. Specifically,
the team is characterizing the proteome of subcellular structures
located within chloroplasts.
Dr. Jerrrold Lokensgard (Lawrence University Chemistry Department)
is working with undergraduate Yong Seokchoi to characterize
a novel kairomone produced by Chaoborus that affects Daphnia. For
their study, Lokensgard and Seokchoi are using our electrospray-ionization
ion trap mass spectrometer.
Dr. Michelle Michalski (UW Oshkosh Biology Department) and undergraduates
Megan Erickson, Rebecca Selle and Carla Rosenfield are
using the gel imaging instrumentation in the Core Facility to determine
the prevalence of tickborne disease in Wisconsin ticks and deer. Specifically,
DNA from Anaplasma phagocytophilum, a bacterium that causes Human
Granulocytic Granulosis in humans is being amplified from deer blood
and visualized on the GelDoc EQ.
More updates to follow. . .